In
| Player | Team | Date | Fee |
|---|---|---|---|
| Arouna Kone | Wigan Athletic | 8 July 2013 | £6,000,000 |
| Antolin Alcaraz | Free agent | 9 July 2013 | Free |
| Joel Robles | Atletico Madrid | 9 July 2013 | £3,500,000 |
| Gerard Deulofeu | Barcelona | 10 July 2013 | Season-long loan |
| James McCarthy | Wigan Athletic | 2 September 2013 | £13,000,000 |
| Gareth Barry | Manchester City | 2 September 2013 | Season-long loan |
| Romelu Lukaku | Chelsea | 2 September 2013 | Loan to end of the season |
| Aiden McGeady | Spartak Moscow | 11 January 2014 | £1,500,000 |
| Lacina Traore | Monaco | 24 January 2014 | Loan to end of the season |
| Jindrich Stanek | Sparta Prague | 31 January 2014 | Undisclosed |
| Total (initial fees only): | £24,000,000 | ||
- Antolin Alcaraz (Free agent) – Released by Wigan Athletic.
Out
| Player | Team | Date | Fee |
|---|---|---|---|
| Phil Neville | Retired | 8 June 2013 | |
| Jake Bidwell | Brentford | 17 June 2013 | Undisclosed |
| George Waring | Stoke City | 1 July 2013 | Free |
| Jan Mucha | Released | 1 July 2013 | |
| Sam Kelly | Released | 1 July 2013 | |
| Thomas Hitzlsperger | Released | 1 July 2013 | |
| Tom Molyneux | Released | 1 July 2013 | |
| Jasper Johns | Sheffield United | 1 July 2013 | Free |
| Johan Hammar | Malmo | 1 July 2013 | Free |
| Conor McAleny | Brentford | 25 July 2013 | 5-month loan [recalled] |
| Francisco Junior | Vitesse Arnhem | 1 September 2013 | Loan to end of the season [recalled] |
| Marouane Fellaini | Manchester United | 2 September 2013 | £27,500,000 |
| Victor Anichebe | West Bromwich Albion | 2 September 2013 | £6,000,000 |
| Luke Garbutt | Colchester United | 13 September 2013 | 28-day loan (extended to 5 months) [recalled] |
| Shane Duffy | Yeovil Town | 26 September 2013 | 1-month loan (extended to 3 months) |
| John Lundstram | Yeovil Town | 28 November 2013 | 1-month loan (extended to end of the season) [recalled] |
| Hallam Hope | Northampton Town | 1 January 2014 | 1-month loan |
| Matthew Pennington | Tranmere Rovers | 1 January 2014 | 1-month loan (extended to 2 months) [recalled] |
| Shane Duffy | Yeovil Town | 1 January 2014 | Loan to end of the season |
| Chris Long | MK Dons | 7 January 2014 | 1-month loan |
| Matthew Kennedy | Tranmere Rovers | 9 January 2014 | 1-month loan (extended to 2 months) |
| Tyias Browning | Wigan Athletic | 10 January 2014 | 1-month loan |
| Nikica Jelavic | Hull City | 15 January 2014 | £6,500,000 (+£1,000,000 add-ons) |
| Mason Springthorpe | Woking | 20 January 2014 | 1-month loan |
| John Heitinga | Fulham | 31 January 2014 | Free |
| Francisco Junior | Stromgodset | 20 February 2014 | 5-month loan (extended to 6 months) |
| Matthew Pennington | Tranmere Rovers | 23 March 2014 | Loan to end of the season |
| Matthew Kennedy | MK Dons | 26 March 2014 | Loan to end of the season |
| Apostolos Vellios | Blackpool | 27 March 2014 | Loan to end of the season |
| Hallam Hope | Bury | 27 March 2014 | Loan to end of the season |
| John Lundstram | Leyton Orient | 27 March 2014 | 1-month loan (extended to end of the season) |
| Total (initial fees only): | £40,000,000 | ||
- George Waring (Stoke City) – Deal agreed on 17th May 2013.
- Jan Mucha (Released) – Eventually joined Krylia Sovetov on 17th July 2013.
- Sam Kelly (Released) – Eventually joined Cambridge City on 3rd February 2014.
- Thomas Hitzlsperger (Released) – Eventually retired on 3rd September 2013.
- Tom Molyneux (Released) – Eventually joined an unknown club in November 2013 before joining Rhyl the following month.
- Jasper Johns (Sheffield United) – Deal agreed on 25th June 2013.
- Johan Hammar (Malmo) – Deal agreed in June 2013.
- Conor McAleny (Brentford) – Conor McAleny's loan spell at Brentford was cut short in September 2013 after suffering a tibia fracture.
- Francisco Junior (Vitesse Arnhem) – Francisco Junior's loan spell at Vitesse Arnhem was cut short due to injury.
- Luke Garbutt (Colchester United) – Everton recalled Luke Garbutt in January 2016 after Bryan Oviedo suffered a double leg break.
- John Lundstram (Yeovil Town) – Everton recalled John Lundstram in March 2014.
- Matthew Pennington (Tranmere Rovers) – Everton recalled Matthew Pennington in February 2014.
| Income | £40,000,000 |
| Expenditure | £24,000,000 |
| Net Spend | -£16,000,000 |